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植物中的免疫系统研究进展

花匠小妙招
2024-09-25 18:13

[1] Jones, J.D.G. and Dangl, J.L. (2006) The Plant Immune System. Nature, 444, 323-329.
https://doi.org/10.1038/nature05286 [2] Boller, T. and Yang, S. (2009) Innate Immunity in Plants: An Arms Race between Pattern Recognition Receptors in Plants and Effectors in Microbial Pathogens. Science, 324, 742-744.
https://doi.org/10.1126/science.1171647 [3] Zhou, J.-M. and Zhang, Y. (2020) Plant Immunity: Danger Percep-tion and Signaling. Cell, 181, 978-989.
https://doi.org/10.1016/j.cell.2020.04.028 [4] Zipfel, C., Robatzek, S., Navarro, L., et al. (2004) Bacterial Disease Resistance in Arabidopsis through Flagellin Perception. Nature, 428, 764-767.
https://doi.org/10.1038/nature02485 [5] Melotto, M., Underwood, W., Koczan, J., Nomura, K. and He, S.Y. (2006) Plant Stomata Function in Innate Immunity against Bacterial Invasion. Cell, 126, 969-80.
https://doi.org/10.1016/j.cell.2006.06.054 [6] Chen, T., Nomura, K., Wang, X., et al. (2020) A Plant Genetic Network for Preventing Dysbiosis in the Phyllosphere. Nature, 580, 653-657.
https://doi.org/10.1038/s41586-020-2185-0 [7] Xin, X.-F., Kvitko, B. and He, S.Y. (2018) Pseudomonas syrin-gae: What It Takes to Be a Pathogen. Nature Reviews Microbiology, 16, 316-328.
https://doi.org/10.1038/nrmicro.2018.17 [8] Rocafort, M., Fudal, I. and Mesarich, C.H. (2020) Apoplastic Effec-tor Proteins of Plant-Associated Fungi and Oomycetes. Current Opinion in Plant Biology, 56, 9-19.
https://doi.org/10.1016/j.pbi.2020.02.004 [9] Couto, D. and Zipfel, C. (2016) Regulation of Pattern Recognition Receptor Signalling in Plants. Nature Reviews Immunology, 16, 537-552.
https://doi.org/10.1038/nri.2016.77 [10] Cui, H., Tsuda, K. and Parker, J.E. (2015) Effector-Triggered Immunity: From Pathogen Perception to Robust Defense. Annual Review of Plant Biology, 66, 487-511.
https://doi.org/10.1146/annurev-arplant-050213-040012 [11] Jones, J.D.G., Vance, R.E. and Dangl, J.L. (2016) Intracellular Innate Immune Surveillance Devices in Plants and Animals. Science, 354, eaaf6395.
https://doi.org/10.1126/science.aaf6395 [12] Tsuda, K. and Katagiri, F. (2010) Comparing Signaling Mechanisms Engaged in Pattern-Triggered and Effector-Triggered Immunity. Current Opinion in Plant Biology, 13, 459-465.
https://doi.org/10.1016/j.pbi.2010.04.006 [13] Thulasi Devendrakumar, K., Li, X. and Zhang, Y. (2018) MAP Ki-nase Signalling: Interplays between Plant PAMP- and Effector-Triggered Immunity. Cellular and Molecular Life Scienc-es, 75, 2981-2989.
https://doi.org/10.1007/s00018-018-2839-3 [14] Peng, Y., van Wersch, R. and Zhang, Y. (2017) Convergent and Divergent Signaling in PAMP-Triggered Immunity and Effector-Triggered Immunity. Molecular Plant-Microbe Interac-tions, 31, 403-409.
https://doi.org/10.1094/MPMI-06-17-0145-CR [15] Boutrot, F. and Zipfel, C. (2017) Function, Discovery, and Exploitation of Plant Pattern Recognition Receptors for Broad-Spectrum Disease Resistance. Annual Review of Phyto-pathology, 55, 257-286.
https://doi.org/10.1146/annurev-phyto-080614-120106 [16] Albert, I., Böhm, H., Albert, M., et al. (2015) An RLP23-SOBIR1-BAK1 Complex Mediates NLP-Triggered Immunity. Nature Plants, 1, Article No. 15140.
https://doi.org/10.1038/nplants.2015.140 [17] Liebrand, T.W.H., van den Berg, G.C.M., Zhang, Z., et al. (2013) Receptor-Like Kinase SOBIR1/EVR Interacts with Receptor-Like Proteins in Plant Immunity against Fungal Infection. Proceedings of the National Academy of Sciences of the United States of America, 110, 10010-10015.
https://doi.org/10.1073/pnas.1220015110 [18] Zhang, W., Fraiture, M., Kolb, D., et al. (2013) Arabidopsis RECEPTOR-LIKE PROTEIN30 and Receptor-Like Kinase SUPPRESSOR OF BIR1-1/EVERSHED Mediate Innate Immunity to Necrotrophic Fungi. The Plant Cell, 25, 4227-4241.
https://doi.org/10.1105/tpc.113.117010 [19] Chinchilla, D., Zipfel, C., Robatzek, S., et al. (2007) A Flagel-lin-Induced Complex of the Receptor FLS2 and BAK1 Initiates Plant Defence. Nature, 448, 497-500.
https://doi.org/10.1038/nature05999 [20] Cao, Y., Liang, Y., Tanaka, K., et al. (2014) The Kinase LYK5 Is a Major Chitin Receptor in Arabidopsis and Forms a Chitin-Induced Complex with Related Kinase CERK1. elife, 3, e03766.
https://doi.org/10.7554/eLife.03766 [21] Sun, Y., Li, L., Macho, A.P., et al. (2013) Structural Basis for Flg22-Induced Activation of the Arabidopsis FLS2-BAK1 Immune Complex. Science, 342, 624-628.
https://doi.org/10.1126/science.1243825 [22] Lu, D.P., Wu, S.J., Gao, X.Q., et al. (2010) A Receptor-Like Cyto-plasmic Kinase, BIK1, Associates with a Flagellin Receptor Complex to Initiate Plant Innate Immunity. Proceedings of the National Academy of Sciences of the United States of America, 107, 496-501.
https://doi.org/10.1073/pnas.0909705107 [23] Zhang, J., Li, W., Xiang, T., et al. (2010) Receptor-Like Cytoplas-mic Kinases Integrate Signaling from Multiple Plant Immune Receptors and Are Targeted by a Pseudomonas syringae Effector. Cell Host & Microbe, 7, 290-301.
https://doi.org/10.1016/j.chom.2010.03.007 [24] Liang, X. and Zhou, J.-M. (2018) Receptor-Like Cytoplasmic Ki-nases: Central Players in Plant Receptor Kinase-Mediated Signaling. Annual Review of Plant Biology, 69, 267-299.
https://doi.org/10.1146/annurev-arplant-042817-040540 [25] Tian, W., Hou, C., Ren, Z., et al. (2019) A Calmodu-lin-Gated Calcium Channel Links Pathogen Patterns to Plant Immunity. Nature, 572, 131-135.
https://doi.org/10.1038/s41586-019-1413-y [26] Thor, K., Jiang, S., Michard, E., et al. (2020) The Calci-um-Permeable Channel OSCA1.3 Regulates Plant Stomatal Immunity. Nature, 585, 569-573.
https://doi.org/10.1038/s41586-020-2702-1 [27] Wang, J., Liu, X.I., Zhang, A.N., et al. (2019) A Cyclic Nucleo-tide-Gated Channel Mediates Cytoplasmic Calcium Elevation and Disease Resistance in Rice. Cell Research, 29, 820-831.
https://doi.org/10.1038/s41422-019-0219-7 [28] Wang, C., Wang, G., Zhang, C., et al. (2017) Os-CERK1-Mediated Chitin Perception and Immune Signaling Requires Receptor-Like Cytoplasmic Kinase 185 to Activate an MAPK Cascade in Rice. Molecular Plant, 10, 619-633.
https://doi.org/10.1016/j.molp.2017.01.006 [29] Yamada, K., Yamaguchi, K., Yoshimura, S., Terauchi, A. and Kawasaki, T. (2017) Conservation of Chitin-Induced MAPK Signaling Pathways in Rice and Arabidopsis. Plant and Cell Physiology, 58, 993-1002.
https://doi.org/10.1093/pcp/pcx042 [30] Jubic, L.M., Saile, S., Furzer, O.J., El Kasmi, F. and Dangl, J.L. (2019) Help Wanted: Helper NLRs and Plant Immune Responses. Current Opinion in Plant Biology, 50, 82-94.
https://doi.org/10.1016/j.pbi.2019.03.013 [31] Qi, T., Seong, K., Thomazella, D.P.T., et al. (2018) NRG1 Func-tions Downstream of EDS1 to Regulate TIR-NLR-Mediated Plant Immunity in Nicotiana benthamiana. Proceedings of the National Academy of Sciences of the United States of America, 115, E10979-E10987.
https://doi.org/10.1073/pnas.1814856115 [32] Castel, B., Ngou, P.-M., Cevik, V., et al. (2019) Diverse NLR Im-mune Receptors Activate Defence via the RPW8-NLR NRG1. New Phytologist, 222, 966-980.
https://doi.org/10.1111/nph.15659 [33] Wu, Z., Li, M., Dong, O.X., et al. (2019) Differential Regulation of TNL-Mediated Immune Signaling by Redundant Helper CNLs. New Phytologist, 222, 938-953.
https://doi.org/10.1111/nph.15665 [34] Saile, S.C., Jacob, P., Castel, B., et al. (2020) Two Unequally Redundant “Helper” Immune Receptor Families Mediate Arabidopsis thaliana Intracellular “Sensor” Immune Receptor Functions. PLOS Biology, 18, e3000783.
https://doi.org/10.1371/journal.pbio.3000783 [35] Wang, J., Wang, J., Hu, M., et al. (2019) Ligand-Triggered Al-losteric ADP Release Primes a Plant NLR Complex. Science, 364, eaav5868.
https://doi.org/10.1126/science.aav5868 [36] Wang, J., Hu, M., Wang, J., et al. (2019) Reconstitution and Structure of a Plant NLR Resistosome Conferring Immunity. Science, 364, eaav5870.
https://doi.org/10.1126/science.aav5870 [37] Ma, S., Lapin, D., Liu, L., et al. (2020) Direct Pathogen-Induced As-sembly of an NLR Immune Receptor Complex to form a Holoenzyme. Science, 370, eabe3069.
https://doi.org/10.1126/science.abe3069 [38] Martin, R., Qi, T., Zhang, H., et al. (2020) Structure of the Activated ROQ1 Resistosome Directly Recognizing the Pathogen Effector XopQ. Science, 370, eabd9993.
https://doi.org/10.1126/science.abd9993 [39] Horsefield, S., Burdett, H., Zhang, X., et al. (2019) NAD+ Cleavage Activity by Animal and Plant TIR Domains in Cell Death Pathways. Science, 365, 793-799.
https://doi.org/10.1126/science.aax1911 [40] Wan, L., Essuman, K., Anderson, R.G., et al. (2019) TIR Domains of Plant Immune Receptors Are NAD+-Cleaving enzymes That Promote Cell Death. Science, 365, 799-803.
https://doi.org/10.1126/science.aax1771 [41] Shao, F., Golstein, C., Ade, J., et al. (2003) Cleavage of Arabidopsis PBS1 by a Bacterial Type III Effector. Science, 301, 1230-1233.
https://doi.org/10.1126/science.1085671 [42] Wang, G., Roux, B., Feng, F., et al. (2015) The Decoy Substrate of a Pathogen Effector and a Pseudokinase Specify Pathogen-Induced Modified-Self Recognition and Immunity in Plants. Cell Host & Microbe, 18, 285-295.
https://doi.org/10.1016/j.chom.2015.08.004 [43] Bastedo, D.P., Khan, M., Martel, A., et al. (2019) Perturbations of the ZED1 Pseudokinase Activate Plant Immunity. PLOS Pathogens, 15, e1007900.
https://doi.org/10.1371/journal.ppat.1007900 [44] Yuan, M., Jiang, Z., Bi, G., et al. (2021) Pattern-Recognition Receptors Are Required for NLR-Mediated Plant Immunity. Nature, 592, 105-109.
https://doi.org/10.1038/s41586-021-03316-6 [45] Roux, M., Schwessinger, B., Albrecht, C., et al. (2011) The Ar-abidopsis Leucine-Rich Repeat Receptor-Like Kinases BAK1/SERK3 and BKK1/SERK4 Are Required for Innate Im-munity to Hemibiotrophic and Biotrophic Pathogens. The Plant Cell, 23, 2440-2455.
https://doi.org/10.1105/tpc.111.084301 [46] Ngou, B.P.M., Ahn, H.-K., Ding, P. and Jones, J.D.G. (2021) Mutual Potentiation of Plant Immunity by Cell-Surface and Intracellular Receptors. Nature, 592, 110-115.
https://doi.org/10.1038/s41586-021-03315-7 [47] Ma, Y., Walker, R.K., Zhao, Y. and Berkowitz, G.A. (2012) Linking Ligand Perception by PEPR Pattern Recognition Receptors to Cytosolic Ca2+ Elevation and Downstream Im-mune Signaling in Plants. Proceedings of the National Academy of Sciences of the United States of America, 109, 19852-19857.
https://doi.org/10.1073/pnas.1205448109 [48] Hatsugai, N., Igarashi, D., Mase, K., et al. (2017) A Plant Effector-Triggered Immunity Signaling Sector Is Inhibited by Pattern-Triggered Immunity. The EMBO Journal, 36, 2758-2769.
https://doi.org/10.15252/embj.201796529 [49] Zhang, S. and Klessig, D.F. (1998) Resistance Gene N-Mediated de Novo Synthesis and Activation of a Tobacco Mitogen-Activated Protein Kinase by Tobacco Mosaic Virus Infection. Proceedings of the National Academy of Sciences of the United States of America, 95, 7433-7438.
https://doi.org/10.1073/pnas.95.13.7433 [50] Narusaka, M., Shirasu, K., Noutoshi, Y., et al. (2009) RRS1 and RPS4 Provide a Dual Resistance-Gene System against Fungal and Bacterial Pathogens. The Plant Journal, 60, 218-226.
https://doi.org/10.1111/j.1365-313X.2009.03949.x [51] Tateda, C., Zhang, Z., Shrestha, J., et al. (2014) Salicylic Acid Regulates Arabidopsis Microbial Pattern Receptor Kinase Levels and Signaling. The Plant Cell, 26, 4171-4187.
https://doi.org/10.1105/tpc.114.131938 [52] Beckers, G.J.M., Jaskiewicz, M., Liu, Y., et al. (2009) Mito-gen-Activated Protein Kinases 3 and 6 Are Required for Full Priming of Stress Responses in Arabidopsis thaliana. The Plant Cell, 21, 944-953.
https://doi.org/10.1105/tpc.108.062158 [53] Lukan, T., Pompe-Novak, M., Baebler, Š., et al. (2020) Precision Transcriptomics of Viral Foci Reveals the Spatial Regulation of Immune-Signaling Genes and Identifies RBOHD as an Important Player in the Incompatible Interaction Between Potato Virus Y and Potato. The Plant Journal, 104, 645-661.
https://doi.org/10.1111/tpj.14953 [54] Pogany, M., von Rad, U., Grun, S., et al. (2009) Dual Roles of Reactive Oxygen Species and NADPH Oxidase RBOHD in an Arabidopsis-Alternaria Pathosystem. Plant Physiology, 151, 1459-1475.
https://doi.org/10.1104/pp.109.141994 [55] Xu, G.Y., Greene, G.H., Yoo, H.J., et al. (2017) Global Translational Reprogramming Is a Fundamental Layer of Immune Regulation in Plants. Nature, 545, 487-490.
https://doi.org/10.1038/nature22371 [56] Meteignier, L.-V., El Oirdi, M., Cohen, M., et al. (2017) Translatome Analysis of an NB-LRR Immune Response Identifies Important Contributors to Plant Immunity in Arabidopsis. Journal of Experimental Botany, 68, 2333-2344.
https://doi.org/10.1093/jxb/erx078 [57] Yoo, H., Greene, G.H., Yuan, M., et al. (2020) Translational Regulation of Metabolic Dynamics during Effector-Triggered Immunity. Molecular Plant, 13, 88-98.
https://doi.org/10.1016/j.molp.2019.09.009 [58] Levine, A., Tenhaken, R., Dixon, R. and Lamb, C. (1994) H2O2 from the Oxidative Burst Orchestrates the Plant Hypersensitive Disease Resistance Response. Cell, 79, 583-593.
https://doi.org/10.1016/0092-8674(94)90544-4 [59] Chandra, S., Martin, G.B. and Low, P.S. (1996) The Pto Ki-nase Mediates a Signaling Pathway Leading to the Oxidative Burst in Tomato. Proceedings of the National Academy of Sciences of the United States of America, 93, 13393-13397.
https://doi.org/10.1073/pnas.93.23.13393 [60] Draper, J. (1997) Salicylate, Superoxide Synthesis and Cell Suicide in Plant Defence. Trends in Plant Science, 2, 162-165.
https://doi.org/10.1016/S1360-1385(97)01030-3 [61] Chai, H.B. and Doke, N. (1987) Activation of the Potential of Potato Leaf Tissue to React Hypersensitively to Phytophthora infestans by Cytospore Germination Fluid and the Enhancement of This Potential by Calcium Ions. Physiological and Molecular Plant Pathology, 30, 27-37.
https://doi.org/10.1016/0885-5765(87)90080-4 [62] Lee, D., Lal, N.K., Lin, Z.-J.D., et al. (2020) Regulation of Reactive Oxygen Species during Plant Immunity through Phosphorylation and Ubiq-uitination of RBOHD. Nature Communications, 11, Article No. 1838.
https://doi.org/10.1038/s41467-020-15601-5 [63] Dubiella, U., Seybold, H., Durian, G., et al. (2013) Calci-um-Dependent Protein Kinase/NADPH Oxidase Activation Circuit Is Required for Rapid Defense Signal Propagation. Proceedings of the National Academy of Sciences of the United States of America, 110, 8744-8749.
https://doi.org/10.1073/pnas.1221294110 [64] Zhang, M., Chiang, Y.-H., Toruno, T.Y., et al. (2018) The MAP4 Kinase SIK1 Ensures Robust Extracellular ROS Burst and Antibacterial Immunity in Plants. Cell Host & Microbe, 24, 379-391.
https://doi.org/10.1016/j.chom.2018.08.007 [65] Kimura, S., Hunter, K., Vaahtera, L., et al. (2020) CRK2 and C-Terminal Phosphorylation of NADPH Oxidase RBOHD Regulate Reactive Oxygen Species Production in Arabidop-sis. The Plant Cell, 32, 1063-1080.
https://doi.org/10.1105/tpc.19.00525 [66] Kadota, Y., Liebrand, T.W.H., Goto, Y., et al. (2019) Quantitative Phosphoproteomic Analysis Reveals Common Regulatory Mechanisms between Effector- and PAMP-Triggered Immun-ity in Plants. New Phytologist, 221, 2160-2175.
https://doi.org/10.1111/nph.15523 [67] Torres, M.A., Dangl, J.L. and Jones, J.D.G. (2002) Arabidopsis gp91phox Homologues AtrbohD and AtrbohF Are Required for Accumulation of Reactive Oxygen Intermediates in the Plant De-fense Response. Proceedings of the National Academy of Sciences of the United States of America, 99, 517-522.
https://doi.org/10.1073/pnas.012452499 [68] Adachi, H., Nakano, T., Miyagawa, N., et al. (2015) WRKY Tran-scription Factors Phosphorylated by MAPK Regulate a Plant Immune NADPH Oxidase in Nicotiana benthamiana. The Plant Cell, 27, 2645-2663.
https://doi.org/10.1105/tpc.15.00213 [69] Shang-Guan, K., Wang, M., Htwe, N.M.P.S., et al. (2018) Lipopoly-saccharides Trigger Two Successive Bursts of Reactive Oxygen Species at Distinct Cellular Locations. Plant Physiology, 176, 2543-2556.
https://doi.org/10.1104/pp.17.01637 [70] De Torres Zabala, M., Littlejohn, G., Jayaraman, S., et al. (2015) Chloro-plasts Play a Central Role in Plant Defence and Are Targeted by Pathogen Effectors. Nature Plants, 1, Article No. 15074.
https://doi.org/10.1038/nplants.2015.74 [71] Su, J.B., Yang, L.Y., Zhu, Q.K., et al. (2018) Active Photosynthetic Inhibition Mediated by MPK3/MPK6 Is Critical to Effector-Triggered Immunity. PLOS Biology, 16, e2004122.
https://doi.org/10.1371/journal.pbio.2004122 [72] Ogasawara, Y., Kaya, H., Hiraoka, G., et al. (2008) Synergistic Activation of the Arabidopsis NADPH Oxidase AtrbohD by Ca2+ and Phosphorylation. Journal of Biological Chemistry, 283, 8885-8892.
https://doi.org/10.1074/jbc.M708106200 [73] Grant, M., Brown, I., Adams, S., et al. (2000) The RPM1 Plant Dis-ease Resistance Gene Facilitates a Rapid and Sustained Increase in Cytosolic Calcium That Is Necessary for the Oxidative Burst and Hypersensitive Cell Death. The Plant Journal, 23, 441-450.
https://doi.org/10.1046/j.1365-313x.2000.00804.x [74] Yu, I.-C., Parker, J. and Bent, A.F. (1998) Gene-for-Gene Disease Resistance without the Hypersensitive Response in Arabidopsis dnd1 Mutant. Proceedings of the National Academy of Sciences of the United States of America, 95, 7819-7824.
https://doi.org/10.1073/pnas.95.13.7819 [75] Balagué, C., Lin, B., Alcon, C., et al. (2003) HLM1, an Essential Signaling Component in the Hypersensitive Response, Is a Member of the Cyclic Nucleotide-Gated Channel Ion Channel Family. The Plant Cell, 15, 365-379.
https://doi.org/10.1105/tpc.006999 [76] Clough, S.J., Fengler, K.A., Yu, I.-C., et al. (2000) The Arabidopsis dnd1 “Defense, No Death” Gene Encodes a Mutated Cyclic Nucleotide-Gated Ion Channel. Proceedings of the National Academy of Sciences of the United States of America, 97, 9323-9328.
https://doi.org/10.1073/pnas.150005697 [77] Jurkowski, G.I., Smith Jr., R.K., Yu, I.-C., et al. (2004) Arabidopsis DND2, a Second Cyclic Nucleotide-Gated Ion Channel Gene for Which Mutation Causes the “Defense, No Death” Phe-notype. Molecular Plant-Microbe Interactions, 17, 511-520.
https://doi.org/10.1094/MPMI.2004.17.5.511 [78] Yoshioka, K., Moeder, W., Kang, H.G., et al. (2006) The Chi-meric Arabidopsis CYCLIC NUCLEOTIDE-GATED ION CHANNEL11/12 Activates Multiple Pathogen Resistance Responses. The Plant Cell, 18, 747-763.
https://doi.org/10.1105/tpc.105.038786 [79] Wu, Y., Kuzma, J., Maréchal, E., et al. (1997) Abscisic Acid Signaling through Cyclic ADP-Ribose in Plants. Science, 278, 2126-2130.
https://doi.org/10.1126/science.278.5346.2126 [80] Asai, T., Tena, G., Plotnikova, J., et al. (2002) MAP Kinase Signalling Cascade in Arabidopsis Innate Immunity. Nature, 415, 977-983.
https://doi.org/10.1038/415977a [81] Tsuda, K., Mine, A., Bethke, G., et al. (2013) Dual Regulation of Gene Ex-pression Mediated by Extended MAPK Activation and Salicylic Acid Contributes to Robust Innate Immunity in Ara-bidopsis thaliana. PLOS Genetics, 9, e1004015.
https://doi.org/10.1371/journal.pgen.1004015 [82] Yamada, K., Yamaguchi, K., Shirakawa, T., et al. (2016) The Arabidopsis CERK1-Associated Kinase PBL27 Connects Chitin Perception to MAPK Activation. The EMBO Journal, 35, 2468-2483.
https://doi.org/10.15252/embj.201694248 [83] Ngou, B.P.M., Ahn, H.-K., Ding, P., et al. (2020) Estradi-ol-Inducible AvrRps4 Expression Reveals Distinct Properties of TIR-NLR-Mediated Effector-Triggered Immunity. Journal of Experimental Botany, 71, 2186-2197.
https://doi.org/10.1093/jxb/erz571 [84] Cui, H.T., Gobbato, E., Kracher, B., et al. (2017) A Core Function of EDS1 with PAD4 Is to Protect the Salicylic Acid Defense Sector in Arabidopsis Immunity. New Phytologist, 213, 1802-1817.
https://doi.org/10.1111/nph.14302 [85] Tao, Y., Xie, Z., Chen, W., et al. (2003) Quantitative Nature of Arabidopsis Responses during Compatible and Incompatible Interactions with the Bacterial Pathogen Pseudomonas syringae. The Plant Cell, 15, 317-330.
https://doi.org/10.1105/tpc.007591 [86] Bozsó, Z., Ott, P.G., Kaman-Toth, E., et al. (2016) Overlapping Yet Re-sponse-Specific Transcriptome Alterations Characterize the Nature of Tobacco-Pseudomonas syringae Interactions. Frontiers in Plant Science, 7, Article 251.
https://doi.org/10.3389/fpls.2016.00251 [87] Jain, P., Singh, P.K., Kapoor, R., et al. (2017) Understanding Host-Pathogen Interactions with Expression Profiling of NILs Carrying Rice-Blast Resistance Pi9 Gene. Frontiers in Plant Science, 8, Article 93.
https://doi.org/10.3389/fpls.2017.00093 [88] Wang, X.J., Liu, W., Chen, X.M., et al. (2010) Differential Gene Ex-pression in Incompatible Interaction between Wheat and Stripe Rust Fungus Revealed by cDNA-AFLP and Comparison to Compatible Interaction. BMC Plant Biology, 10, Article No. 9.
https://doi.org/10.1186/1471-2229-10-9 [89] Rinaldi, C., Kohler, A., Frey, P., et al. (2007) Transcript Profiling of Poplar Leaves upon Infection with Compatible and Incompatible Strains of the Foliar Rust Melampsora larici-populina. Plant Physiology, 144, 347-366.
https://doi.org/10.1104/pp.106.094987 [90] Mine, A., Seyfferth, C., Kracher, B., et al. (2018) The Defense Phyto-hormone Signaling Network Enables Rapid, High-Amplitude Transcriptional Reprogramming during Effector-Triggered Immunity. The Plant Cell, 30, 1199-1219.
https://doi.org/10.1105/tpc.17.00970 [91] Duan, Y., Duan, S., Armstrong, M.R., et al. (2020) Comparative Tran-scriptome Profiling Reveals Compatible and Incompatible Patterns of Potato toward Phytophthora infestans. G3: Genes|Genomes|Genetics, 10, 623-634.
https://doi.org/10.1534/g3.119.400818 [92] Lin, F., Zhao, M.X., Baumann, D.D., et al. (2014) Molecular Re-sponse to the Pathogen Phytophthora sojae among Ten Soybean near Isogenic Lines Revealed by Comparative Tran-scriptomics. BMC Genomics, 15, Article No. 18.
https://doi.org/10.1186/1471-2164-15-18 [93] Ding, P., Ngou, B.P.M., Furzer, O.J., et al. (2020) High-Resolution Expression Profiling of Selected Gene Sets during Plant Immune Activation. Plant Biotechnology Journal, 18, 1610-1619.
https://doi.org/10.1111/pbi.13327 [94] Jacob, F., Kracher, B., Mine, A., et al. (2018) A Domi-nant-Interfering camta3 Mutation Compromises Primary Transcriptional Outputs Mediated by Both Cell Surface and In-tracellular Immune Receptors in Arabidopsis thaliana. New Phytologist, 217, 1667-1680.
https://doi.org/10.1111/nph.14943 [95] Mang, H., Feng, B., Hu, Z., et al. (2017) Differential Regulation of Two-Tiered Plant Immunity and Sexual Reproduction by ANXUR Receptor-Like Kinases. The Plant Cell, 29, 3140-3156.
https://doi.org/10.1105/tpc.17.00464 [96] Akamatsu, A., Fujiwara, M., Hamada, S., et al. (2021) The Small GTPase OsRac1 Forms Two Distinct Immune Receptor Complexes Containing the PRR OsCERK1 and the NLR Pit. Plant and Cell Physiology, 62, 1662-1675.
https://doi.org/10.1093/pcp/pcab121 [97] Boccara, M., Sarazin, A., Thiébeauld, O., et al. (2014) The Arabidopsis miR472-RDR6 Silencing Pathway Modulates PAMP- and Effector-Triggered Immunity through the Post-transcriptional Control of Disease Resistance Genes. PLOS Pathogens, 10, e1003883.
https://doi.org/10.1371/journal.ppat.1003883 [98] Jiang, C., Fan, Z., Li, Z., et al. (2020) Bacillus cereus AR156 Triggers Induced Systemic Resistance against Pseudomonas syringae pv. tomato DC3000 by Suppressing miR472 and Activating CNLs-Mediated Basal Immunity in Arabidopsis. Molecular Plant Pathology, 21, 854-870.
https://doi.org/10.1111/mpp.12935 [99] Tian, H., Chen, S., Wu, Z., et al. (2020) Activation of TIR Signaling Is Required for Pattern-Triggered Immunity. BioRxiv.
https://doi.org/10.1101/2020.12.27.424494 [100] Pruitt, R.N., Zhang, L., Saile, S.C., et al. (2020) Arabidopsis Cell Surface LRR Immune Receptor Signaling through the EDS1-PAD4-ADR1 Node. BioRxiv.
https://doi.org/10.1101/2020.11.23.391516 [101] Wu, Y., Gao, Y., Zhan, Y., et al. (2020) Loss of the Common Immune Coreceptor BAK1 Leads to NLR-Dependent Cell Death. Proceedings of the National Academy of Sciences of the United States of America, 117, 27044-27053.
https://doi.org/10.1073/pnas.1915339117 [102] Zhang, Z., Wu, Y., Gao, M., et al. (2012) Disruption of PAMP-Induced MAP Kinase Cascade by a Pseudomonas syringae Effector Activates Plant Immunity Mediated by the NB-LRR Protein SUMM2. Cell Host & Microbe, 11, 253-263.
https://doi.org/10.1016/j.chom.2012.01.015 [103] Takagi, M., Hamano, K., Takagi, H., et al. (2019) Disruption of the MAMP-Induced MEKK1-MKK1/MKK2-MPK4 Pathway Activates the TNL Immune Receptor SMN1/RPS6. Plant and Cell Physiology, 60, 778-787.
https://doi.org/10.1093/pcp/pcy243